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赵九洲, 徐瑾, 蒋红丽, 僧明华, 郭万申, 郭永豪, 薛长贵. 河南省甲型H1N1流感病毒神经氨酸酶基因进化分析[J]. 中国公共卫生, 2012, 28(4): 503-505. DOI: 10.11847/zgggws2012-28-04-35
引用本文: 赵九洲, 徐瑾, 蒋红丽, 僧明华, 郭万申, 郭永豪, 薛长贵. 河南省甲型H1N1流感病毒神经氨酸酶基因进化分析[J]. 中国公共卫生, 2012, 28(4): 503-505. DOI: 10.11847/zgggws2012-28-04-35
ZHAO Jiu-zhou, XU Jin, JIANG Hong-li, . Genetic and phylogenetic characterization of neuraminidase of influenza A(H1N1) virus isolated in Henan province, 2009[J]. Chinese Journal of Public Health, 2012, 28(4): 503-505. DOI: 10.11847/zgggws2012-28-04-35
Citation: ZHAO Jiu-zhou, XU Jin, JIANG Hong-li, . Genetic and phylogenetic characterization of neuraminidase of influenza A(H1N1) virus isolated in Henan province, 2009[J]. Chinese Journal of Public Health, 2012, 28(4): 503-505. DOI: 10.11847/zgggws2012-28-04-35

河南省甲型H1N1流感病毒神经氨酸酶基因进化分析

Genetic and phylogenetic characterization of neuraminidase of influenza A(H1N1) virus isolated in Henan province, 2009

  • 摘要: 目的 分析河南省甲型H1N1流感病毒神经氨酸酶(NA)基因的变异情况,了解其变异现状及特点。方法 对35株甲型H1N1流感病毒毒株提取病毒总RNA,设计引物运用RT-PCR技术扩增编码NA蛋白的基因序列,测序分析核酸序列并用MEGA4.1软件构建进化树,用BLAST进行比对分析。结果 分离株NA基因316位G/A和742位A/G(N端106位V/I和248位N/D)发生变异,2个突变位点同时存在;同时,通过BLAST分析,发现我国多个省份和亚洲其它多个地区病毒株NA基因存在945位A/G和1 338位T/C突变,进化树分析发现,这两个位点的突变可能来自于中国猪-人之间相互感染。结论 甲型H1N1流感病毒神经氨酸酶(NA)基因在中国内地传播期间个别核酸位点发生了突变,其氨基酸抗原区有一位点发生变异(106 V/I)。

     

    Abstract: Objective To investigate the genetic characteristics of neuraminidase(NA) protein gene of the novel influenza virus A/H1N1 isolated in Henan province in 2009.Methods Thirty-five H1N1(2009) virus samples were isolated by laboratory of Henan Provincial Center for Disease Contorl and Prevention.After their RNA was extracted,we designed primers for reverse transcription(RT)-PCR to amplify the genes encoding NA protein.In the end,twenty NA genes were sequenced.We dow nloaded other sequences of NA gene of H1N1(2009) from NCBI database.Then the sequence alignment and the phylogenetic tree were constructed by using the MEGA4.1 softw are and NJ method.Results Two base mutation positions,316 G/A and 742 A/G,were found in the isolation of H1N1(2009).And other two mutation positions,945 A/G and 1338 T/C,were found in the isolation of H1N1(2009).The alignment showed that these mutation types were homologous to some sw ine flu NA gene sequences isolated from the swine infected human H1N1(2009).Conclusion The occurrence of the influenza A H1N1 NA gene's mutation had been proved during the first swine flu season in China.There was one change(regions 106 V/I) found in the influenza A H1N1 NA gene's antigenic regions.

     

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