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陈渝宁, 王延伟. 血小板抗原HPA-2基因分型熔解曲线法分析[J]. 中国公共卫生, 2013, 29(9): 1398-1400. DOI: 10.11847/zgggws2013-29-09-53
引用本文: 陈渝宁, 王延伟. 血小板抗原HPA-2基因分型熔解曲线法分析[J]. 中国公共卫生, 2013, 29(9): 1398-1400. DOI: 10.11847/zgggws2013-29-09-53
CHEN Yu-ning, WANG Yan-wei. Genotyping of platelet antigens HPA-2 with melting curve analysis[J]. Chinese Journal of Public Health, 2013, 29(9): 1398-1400. DOI: 10.11847/zgggws2013-29-09-53
Citation: CHEN Yu-ning, WANG Yan-wei. Genotyping of platelet antigens HPA-2 with melting curve analysis[J]. Chinese Journal of Public Health, 2013, 29(9): 1398-1400. DOI: 10.11847/zgggws2013-29-09-53

血小板抗原HPA-2基因分型熔解曲线法分析

Genotyping of platelet antigens HPA-2 with melting curve analysis

  • 摘要: 目的建立熔解曲线分析法进行HPA-2基因分型,并检测大连地区汉族人群HPA-2等位基因频率。方法实时荧光PCR后用熔解曲线分析法进行HPA-2基因分型,与常规PCR-SSP方法进行比较,用熔解曲线分析法对辽宁地区155名汉族血小板捐献者的HPA-2系统进行基因分型,获得HPA-2等位基因分布数据,并与国内部分地区的人群进行比较。结果基因型为HPA-2aa的样本,熔解曲线呈现单一的峰型,Tm值在(85±1) ℃;基因型为HPA-2ab的样本熔解曲线呈现双峰型,Tm值在(80±1) ℃和(85±1) ℃;基因型为HPA-2bb的样本熔解曲线呈现单一的峰型,Tm值在(80±1) ℃。熔解曲线分析法基因分型结果与PCR-SSP法完全一致。大连地区汉族人群HPA-2a、HPA-2b等位基因频率分别为0.9161,0.0838。与南京、上海、新疆地区汉族人群以及新疆地区维吾尔族人群均很相似(P>0.05),但与海南黎族人群相比差异有统计学意义(P<0.05)。结论应用熔解曲线分析法进行HPA-2基因分型具有简单、快速、准确等优点,优于常规的PCR-SSP方法;HPA-2等位基因频率分布在国内存在种族差异。

     

    Abstract: ObjectiveTo develop a genotyping method for human platelet antigens-2(HPA-2)by using melting curve analysis and to investigate the gene frequencies of HPA-2 in Han population in Dalian city.MethodsReal-time PCR was used and melting curve analysis was performed for genotyping of HPA-2.Reproducibility of the method was evaluated and the results of melting curve analysis were compared with those using traditional PCR amplification with sequence-specific primers(PCR-SSP)method.The genotype of HPA-2 in 155 Han platelet donors were determined using melting curve analysis,then the gene frequencies of HPA-2 were compared with that of other populations in China ResultsMelting curve of HPA-2aa sample showed a single peak with the melting temperature(Tm)of 85±1 ℃;melting curve of HPA-2ab sample showed two peaks with the Tm of 80±1 ℃ and 85±1 ℃;and melting curve of HPA-2bb sample showed a single peak,with the Tm of 80±1 ℃.There was complete concordance of results for all samples tested by PCR-SSP and melting curve analysis.The gene frequencies of HPA-2a and HPA-2b in Han populations of Dalian city were 0.9161 and 0.0838,respectively.The distribution of HPA-2 alleles in Liaoning Han populations is similar to that in Nanjing,Shanghai,and Xinjiang Han and Xingjiang Uyghur populations(P>0.05 for all),but it significantly differ from that in Hainan Li national minority people(P<0.05).ConclusionThe method for genotyping of HPA-2 by using melting curve analysis was developed and the method is faster,simpler,and more accurate compared to the results of traditional PCR-SSP.There are differences in HPA-2 genotypes among different race in China.

     

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