Advances in researches on classification, host and human pathgenicity of coronavirus

CHU Kan-kan; GUO Ling; CHEN Li

doi:10.11847/zgggws1136365

Volume 38 Issue 6

Jun. 2022

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CHU Kan-kan, GUO Ling, CHEN Li, . Advances in researches on classification, host and human pathgenicity of coronavirus[J]. Chinese Journal of Public Health, 2022, 38(6): 815-820. doi: 10.11847/zgggws1136365

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CHU Kan-kan, GUO Ling, CHEN Li, . Advances in researches on classification, host and human pathgenicity of coronavirus[J]. Chinese Journal of Public Health, 2022, 38(6): 815-820. doi: 10.11847/zgggws1136365

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Advances in researches on classification, host and human pathgenicity of coronavirus

doi: 10.11847/zgggws1136365

1.
Western Yunnan Key Laboratory for Screening and Research (Cultivation) of Anti-pathogenic Plant Resources, Institute of Preventive Medicine, School of Public Health, Dali University, Dali, Yunnan Province 671000, China

Received Date: 2021-07-28
Available Online: 2021-12-30
Publish Date: 2022-06-01

Abstract

Abstract

Coronavirus (CoV) is a kind of zoonosis virus widely existing in nature. Since the outbreak of severe acute respiratory syndrome (SARS), the incidence of human CoV infections has increased, so as the severity of the infections. In particular, coronavirus disease 2019, which is still pandemic, has become a major public health issue of global concern. This review summarizes the classification, host of CoV and human diseases caused by CoV.
- coronavirus,
- classification,
- host,
- human disease

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References(40)

References

[1]	Cheever FS, Daniels JB, Pappenheimer AM, et al. A murine virus (JHM) causing disseminated encephalomyelitis with extensive destruction of myelin[J]. Journal of Experimental Medicine, 1949, 90(3): 181 – 194. doi: 10.1084/jem.90.3.181
[2]	Huo T, Liu X. Crystallization and preliminary X-ray crystallographic analysis of a nonstructural protein 15 mutant from human coronavirus 229E[J]. Acta Crystallographica Section F:Structural Biology Communications, 2015, 71(9): 1156 – 1160. doi: 10.1107/S2053230X15007359
[3]	Yin YD, Wunderink RG. MERS, SARS and other coronaviruses as causes of pneumonia[J]. Respirology, 2018, 23(2): 130 – 137. doi: 10.1111/resp.13196
[4]	Wong ACP, Li X, Lau SKP, et al. Global epidemiology of bat coronaviruses[J]. Viruses, 2019, 11(2): 174. doi: 10.3390/v11020174
[5]	Chan JFW, Kok KH, Zhu Z, et al. Genomic characterization of the 2019 novel human-pathogenic coronavirus isolated from a patient with atypical pneumonia after visiting Wuhan[J]. Emerging Microbes and Infections, 2020, 9(1): 221 – 236. doi: 10.1080/22221751.2020.1719902
[6]	Coronaviridae Study Group of the International Committee on Taxonomy of Viruses. The species severe acute respiratory syndrome-related coronavirus: classifying 2019-nCoV and naming it SARS-CoV-2[J]. Nature Microbiology, 2020, 5(4): 536 – 544. doi: 10.1038/s41564-020-0695-z
[7]	Hamre D, Procknow JJ. A new virus isolated from the human respiratory tract[J]. Proceedings of the Society for Experimental Biology and Medicine, 1966, 121(1): 190 – 193. doi: 10.3181/00379727-121-30734
[8]	Tyrrell DAJ, Cohen S, Schilarb JE. Signs and symptoms in common colds[J]. Epidemiology and Infection, 1993, 111(1): 143 – 156. doi: 10.1017/S0950268800056764
[9]	Su S, Wong G, Shi WF, et al. Epidemiology, genetic recombination, and pathogenesis of coronaviruses[J]. Trends in Microbiology, 2016, 24(6): 490 – 502. doi: 10.1016/j.tim.2016.03.003
[10]	Corman VM, Baldwin HJ, Tateno AF, et al. Evidence for an ancestral association of human coronavirus 229E with bats[J]. Journal of Virology, 2015, 89(23): 11858 – 11870. doi: 10.1128/JVI.01755-15
[11]	Corman VM, Eckerle I, Memish ZA, et al. Link of a ubiquitous human coronavirus to dromedary camels[J]. Proceedings of the National Academy of Sciences of the United States of America, 2016, 113(35): 9864 – 9869. doi: 10.1073/pnas.1604472113
[12]	McIntosh K, Becker WB, Chanock RM. Growth in suckling-mouse brain of "IBV-like" viruses from patients with upper respiratory tract disease[J]. Proceedings of the National Academy of Sciences of the United States of America, 1967, 58(6): 2268 – 2273. doi: 10.1073/pnas.58.6.2268
[13]	Yeh EA, Collins A, Cohen ME, et al. Detection of coronavirus in the central nervous system of a child with acute disseminated encephalomyelitis[J]. Pediatrics, 2004, 113(1): e73 – e76. doi: 10.1542/peds.113.1.e73
[14]	Morfopoulou S, Brown JR, Davies EG, et al. Human coronavirus OC43 associated with fatal encephalitis[J]. New England Journal of Medicine, 2016, 375(5): 497 – 498. doi: 10.1056/NEJMc1509458
[15]	Beury D, Fléchon L, Maurier F, et al. Use of whole-genome sequencing in the molecular investigation of care-associated HCoV-OC43 infections in a hematopoietic stem cell transplant unit[J]. Journal of Clinical Virology, 2020, 122: 104206. doi: 10.1016/j.jcv.2019.104206
[16]	Vijgen L, Keyaerts E, Moës E, et al. Complete genomic sequence of human coronavirus OC43: molecular clock analysis suggests a relatively recent zoonotic coronavirus transmission event[J]. Journal of Virology, 2005, 79(3): 1595 – 1604. doi: 10.1128/JVI.79.3.1595-1604.2005
[17]	Corman VM, Muth D, Niemeyer D, et al. Hosts and sources of endemic human coronaviruses[J]. Advances in Virus Research, 2018, 100: 163 – 188.
[18]	Kuiken T, Fouchier RA, Schutten M, et al. Newly discovered coronavirus as the primary cause of severe acute respiratory syndrome[J]. The Lancet, 2003, 362(9380): 263 – 270. doi: 10.1016/S0140-6736(03)13967-0
[19]	Guan Y, Zheng BJ, He YQ, et al. Isolation and characterization of viruses related to the SARS coronavirus from animals in southern China[J]. Science, 2003, 302(5643): 276 – 278. doi: 10.1126/science.1087139
[20]	Lau SKP, Woo PCY, Li KSM, et al. Severe acute respiratory syndrome coronavirus-like virus in Chinese horseshoe bats[J]. Proceedings of the National Academy of Sciences of the United States of America, 2005, 102(39): 14040 – 14045. doi: 10.1073/pnas.0506735102
[21]	Li WD, Shi ZL, Yu M, et al. Bats are natural reservoirs of SARS-like coronaviruses[J]. Science, 2005, 310(5748): 676 – 679. doi: 10.1126/science.1118391
[22]	Ge XY, Li JL, Yang XL, et al. Isolation and characterization of a bat SARS-like coronavirus that uses the ACE2 receptor[J]. Nature, 2013, 503(7477): 535 – 538. doi: 10.1038/nature12711
[23]	He B, Zhang YZ, Xu L, et al. Identification of diverse alphacoronaviruses and genomic characterization of a novel severe acute respiratory syndrome-like coronavirus from bats in China[J]. Journal of Virology, 2014, 88(12): 7070 – 7082. doi: 10.1128/JVI.00631-14
[24]	Lau SKP, Feng Y, Chen HL, et al. Severe acute respiratory syndrome (SARS) coronavirus ORF8 protein is acquired from SARS-related coronavirus from greater horseshoe bats through recombination[J]. Journal of Virology, 2015, 89(20): 10532 – 10547. doi: 10.1128/JVI.01048-15
[25]	Hu B, Zeng LP, Yang XL, et al. Discovery of a rich gene pool of bat SARS-related coronaviruses provides new insights into the origin of SARS coronavirus[J]. PLoS Pathogens, 2017, 13(11): e1006698. doi: 10.1371/journal.ppat.1006698
[26]	Van Der Hoek L, Pyrc K, Jebbink MF, et al. Identification of a new human coronavirus[J]. Nature Medicine, 2004, 10(4): 368 – 373. doi: 10.1038/nm1024
[27]	Oosterhof L, Christensen CB, Sengeløv H. Fatal lower respiratory tract disease with human corona virus NL63 in an adult haematopoietic cell transplant recipient[J]. Bone Marrow Transplantation, 2010, 45(6): 1115 – 1116. doi: 10.1038/bmt.2009.292
[28]	Konca C, Korukluoglu G, Tekin M, et al. The first infant death associated with human coronavirus NL63 infection[J]. Pediatric Infectious Disease Journal, 2017, 36(2): 231 – 233. doi: 10.1097/INF.0000000000001390
[29]	Tao Y, Shi M, Chommanard C, et al. Surveillance of bat coronaviruses in Kenya identifies relatives of human coronaviruses NL63 and 229E and their recombination history[J]. Journal of Virology, 2017, 91(5): e01953 – 16.
[30]	Woo PCY, Lau SKP, Chu CM, et al. Characterization and complete genome sequence of a novel coronavirus, coronavirus HKU1, from patients with pneumonia[J]. Journal of Virology, 2005, 79(2): 884 – 895. doi: 10.1128/JVI.79.2.884-895.2005
[31]	Lau SKP, Woo PCY, Yip CCY, et al. Coronavirus HKU1 and other coronavirus infections in Hong Kong[J]. Journal of Clinical Microbiology, 2006, 44(6): 2063 – 2071. doi: 10.1128/JCM.02614-05
[32]	Forni D, Cagliani R, Clerici M, et al. Molecular evolution of human coronavirus genomes[J]. Trends in Microbiology, 2017, 25(1): 35 – 48. doi: 10.1016/j.tim.2016.09.001
[33]	Cui J, Li F, Shi ZL. Origin and evolution of pathogenic coronaviruses[J]. Nature Reviews Microbiology, 2019, 17(3): 181 – 192. doi: 10.1038/s41579-018-0118-9
[34]	Mackay IM, Arden KE. MERS coronavirus: diagnostics, epidemiology and transmission[J]. Virology Journal, 2015, 12: 222. doi: 10.1186/s12985-015-0439-5
[35]	Bleibtreu A, Bertine M, Bertin C, et al. Focus on Middle East respiratory syndrome coronavirus (MERS-CoV)[J]. Médecine et Maladies Infectieuses, 2020, 50(3): 243 – 251.
[36]	Sabir JSM, Lam TTY, Ahmed MMM, et al. Co-circulation of three camel coronavirus species and recombination of MERS-CoVs in Saudi Arabia[J]. Science, 2016, 351(6268): 81 – 84. doi: 10.1126/science.aac8608
[37]	Zhu N, Zhang DY, Wang WL, et al. A Novel Coronavirus from patients with pneumonia in China, 2019[J]. New England Journal of Medicine, 2020, 382(8): 727 – 733. doi: 10.1056/NEJMoa2001017
[38]	Zhou P, Yang XL, Wang XG, et al. A pneumonia outbreak associated with a new coronavirus of probable bat origin[J]. Nature, 2020, 579(7798): 270 – 273. doi: 10.1038/s41586-020-2012-7
[39]	Lam TTY, Jia N, Zhang YW, et al. Identifying SARS-CoV-2-related coronaviruses in Malayan pangolins[J]. Nature, 2020, 583(7815): 282 – 285. doi: 10.1038/s41586-020-2169-0
[40]	Wang Q, Qiu Y, Li JY, et al. A unique protease cleavage site predicted in the spike protein of the novel pneumonia coronavirus (2019-nCoV) potentially related to viral transmissibility[J]. Virologica Sinica, 2020, 35(3): 337 – 339. doi: 10.1007/s12250-020-00212-7