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徐菊玲, 徐伯赢, 周洪昌, 张慧, 段劲, 薛利军, 邵圣文. 结核分枝杆菌荧光定量PCR检测方法建立[J]. 中国公共卫生, 2011, 27(10): 1250-1252. DOI: 10.11847/zgggws-2011-27-10-63
引用本文: 徐菊玲, 徐伯赢, 周洪昌, 张慧, 段劲, 薛利军, 邵圣文. 结核分枝杆菌荧光定量PCR检测方法建立[J]. 中国公共卫生, 2011, 27(10): 1250-1252. DOI: 10.11847/zgggws-2011-27-10-63
XU Ju-ling, XU Bai-ying, ZHOU Hong-chang, . Establishment of fluorescence quantitative PCR assay in detection of Mycobacterium tuberculosis[J]. Chinese Journal of Public Health, 2011, 27(10): 1250-1252. DOI: 10.11847/zgggws-2011-27-10-63
Citation: XU Ju-ling, XU Bai-ying, ZHOU Hong-chang, . Establishment of fluorescence quantitative PCR assay in detection of Mycobacterium tuberculosis[J]. Chinese Journal of Public Health, 2011, 27(10): 1250-1252. DOI: 10.11847/zgggws-2011-27-10-63

结核分枝杆菌荧光定量PCR检测方法建立

Establishment of fluorescence quantitative PCR assay in detection of Mycobacterium tuberculosis

  • 摘要: 目的 探讨结核分枝杆菌实时定量检测方法并进行评价。方法 针对结核杆菌(Mycobacterium tuberculo-sis,Mtb)16S rDNA基因设计引物,应用SYBR Green I建立荧光定量PCR(FQ-PCR)反应体系;提取Mtb基因组DNA,PCR扩增16S rDNA片段,构建重组质粒pMD-TB16S;检测11份肺结核患者痰标本;以甲型链球菌、大肠杆菌等基因组DNA作对照,检验方法特异性,对同一份Mtb DNA模板进行批内和批间检测,计算变异系数(CV)。结果 靶向Mtb 16SrDNA基因引物能够特异扩增Mtb 16S rDNA基因,对照组细菌基因未见扩增,灵敏度为(Mtb基因组DNA)1.2 pg/μL,即(38.9±3.54)拷贝/μL的16S rDNA基因,批内和批间Ct值变异系数分别为0.27%和1.26%。结论 以16S rDNA为靶基因的FQ-PCR技术,能够对Mtb进行快速、敏感而特异的定量检测。

     

    Abstract: Objective To establish and assess a rapid real-time quantifiable method for the detection of Mycobacterium tuberculosis(Mtb).Methods The specific primers targetting 16S rDNA gene in Mtb were designed and the fluorescence quantitative PCR(FQ-PCR)assay was performed with SYBR Green I.After extraction of Mtb genomic DNA,the 16S rDNA fragment was amplified by conventional PCR and used to construct recombinant pMD-TB16S plasmid.Then,the serial dilutions of pMD-TB16S plasmid were subjected to the quantitation standard curve in FQ-PCR assay.The sputum samples from 11 patients with pulmonary tuberculosis were detected by the same FQ-PCR,with various genomic DNAs of Streptococcus viridans,Staphylococcus epidermidis,Staphylococcus aureus,and Escherichia coli used as the negative control to confirm specificity of FQ-PCR assay.The stabiity was analyzed with inter and intra FQ-PCR test by using the same Mtb genomic DNA,and the coefficient of variation(CV)values of threshold cycle(Ct)were calculated.Results The primers targetting Mtb 16S rDNA gene were specific to the amplification of 16S rDNA gene of Mtb but not other bacteria in control group by FQ-PCR,with the sensitivity of 1.2 pg/μL of Mtb genomic DNA or 38.9±3.54 copies/μL of 16S rDNA,and the CV values of Ct were 1.26% and 0.27% for inter and intra FQ-PCR assay.Conclusion The FQ-PCR assay targetting Mtb 16S rDNA gene is of rapid,sensitive,specific,and quantifiable in Mth detection.

     

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