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何敏, 万逢洁, 周凌云, 张旭, 朱江华, 许丁空, 汤卓, 何晓, 张志勇. 反向杂交膜片检测结核菌耐利福平基因突变[J]. 中国公共卫生, 2005, 21(12): 1420-1422. DOI: 10.11847/zgggws2005-21-12-07
引用本文: 何敏, 万逢洁, 周凌云, 张旭, 朱江华, 许丁空, 汤卓, 何晓, 张志勇. 反向杂交膜片检测结核菌耐利福平基因突变[J]. 中国公共卫生, 2005, 21(12): 1420-1422. DOI: 10.11847/zgggws2005-21-12-07
HE Min, WAN Fengjie, ZHOU Lingyun, . Detection of gene mutation of rifampin-resistant Mycobacterium tuberculosis by reverse dot-blot hybridization membrane chip[J]. Chinese Journal of Public Health, 2005, 21(12): 1420-1422. DOI: 10.11847/zgggws2005-21-12-07
Citation: HE Min, WAN Fengjie, ZHOU Lingyun, . Detection of gene mutation of rifampin-resistant Mycobacterium tuberculosis by reverse dot-blot hybridization membrane chip[J]. Chinese Journal of Public Health, 2005, 21(12): 1420-1422. DOI: 10.11847/zgggws2005-21-12-07

反向杂交膜片检测结核菌耐利福平基因突变

Detection of gene mutation of rifampin-resistant Mycobacterium tuberculosis by reverse dot-blot hybridization membrane chip

  • 摘要:
      目的   利用一种新型的反向点杂交膜片, 快速检测结核分枝杆菌耐利福平rpoB基因突变。
      方法   根据结核分枝杆菌rpoB基因序列设计寡核苷酸探针并固定于尼龙膜上, 用生物素标记的引物增扩结核分枝杆菌rpoB基因片断, 与膜片上探针杂交, 膜片检测结果与常规药敏试验结果和测序结果进行对照。
      结果   对63株临床分离株进行检测, 10株利福平敏感株未检测到突变, 53株耐利福平株, 其中48株检测到突变。灵敏度为90.6%, 特异度为100%, 阳性预测值100%, 阴性预测值66.7%。用反向点杂交膜片检测27份肺结核患者的痰标本, 17份非结核的痰液标本。12份耐利福平的痰标本中, 11份检测到突变, 膜片检测与药敏结果的符合率为92.3%;15份利福平敏感的痰标本中, 膜片检测结果有6份出现突变信号; 17份非结核病的其他患者的痰液标本中有1份检测到突变。检测痰标本的灵敏度为91.7%, 特异度为78.1%, 阳性预测值61.1%, 阴性预测值96.1%。
      结论   反向点杂交膜片可简便、快速、较准确地检测出大多数结核分枝杆菌耐利福平分离株的rpoB基因突变。

     

    Abstract:
      Objective   A new method, reverse dot-blothybridization membrane chip, was used to rapidly detect rpoB mutations in Mycobacterium trberculosis.
      Methods   Probes were designed according to the sequence ofMycobacterium tuberculosis rpoB gene and probes were spotted and fixed on nylon membrane.The DNA fragment which contained rpoB gene was amplified with biotin-labelled primers by PCR, and then hybridized wtih probes on membrane chip.The results of membrane chip were compared with the results of traditional drug susceptibility testing and DNA sequencing.
      Results   63 Mycobacterium tuberculosis isolates were detected by membrane chips.No mutation was detected among 10 RFP-susceptive isolates.48 out of 53 RFP-resistant isolates, were detected rpoB gene mutation.The sensitivity and specificity of membrane chip detecting isolates was 90.6% (48/53)and 100% (10/10)respectively.Positive predictive value and negative predictive vlue was 100% and 66.7% respectively.27 sputa specimens of TB patients and 17 sputa specimens of other patients were detected by membrane chips.The rersults showed that 11 specimens were detected rpoB gene mutation among 12 RFP-resistant speciments, the concordance with the traditional drug susceptivility test of mycobacterium tuberculosis was 92.3%.6 specimens were detected mutation by membrane chip among 15 RFP-susceptive specimens and 1 specimen was detcted mutation among 17 sputa specimens from other patients.The sensitivity and specificity of membrane chip detecting sputa specimens was 91.7% (11/12)and 78.1% (25/32)respectively, positive predictive value and negative predictive value was 61.11% and 96.1% respectively.
      Conclusion   rpoB gene mutations in most of the rifampicin-resitant v Mycobacterium tuberculosis can be rapidly, simply, and relagtive accurately detected by using reverse dot-blothybridization membrane chip.

     

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