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张绪富, 戴迎春, 周迎春, 吕志平. GII-4型诺如病毒ORF2基因克隆及序列分析[J]. 中国公共卫生, 2010, 26(2): 194-196. DOI: 10.11847/zgggws2010-26-02-37
引用本文: 张绪富, 戴迎春, 周迎春, 吕志平. GII-4型诺如病毒ORF2基因克隆及序列分析[J]. 中国公共卫生, 2010, 26(2): 194-196. DOI: 10.11847/zgggws2010-26-02-37
ZHANG Xu-fu, DAI Ying-chun, ZHOU Ying-chun, . Clone and sequence of ORF2 gene of GII-4 norovirus[J]. Chinese Journal of Public Health, 2010, 26(2): 194-196. DOI: 10.11847/zgggws2010-26-02-37
Citation: ZHANG Xu-fu, DAI Ying-chun, ZHOU Ying-chun, . Clone and sequence of ORF2 gene of GII-4 norovirus[J]. Chinese Journal of Public Health, 2010, 26(2): 194-196. DOI: 10.11847/zgggws2010-26-02-37

GII-4型诺如病毒ORF2基因克隆及序列分析

Clone and sequence of ORF2 gene of GII-4 norovirus

  • 摘要: 目的获得中国流行株GII-4型诺如病毒(NoV)ORF2基因序列,为进一步研究诊断、疫苗提供基础依据。方法从GII-4型NoV粪便中提取病毒RNA,经逆转录后PCR并克隆到simple PMD18-T载体获得完整开放读码柜架(ORF2)阅读框序列。结果获得了正确序列的基因II-4,亚型(genogroup II-4,GII-4)NOV ORF2基因序列,经软件分析,3株NOV ORF2序列编码的氨基酸大小约为54KD,与VA387(GII-4)氨基酸同源性为92%~93%。ORF2编码的氨基酸序列存在3个相对保守序列。结论获得GII-4型NoV ORF2基因序列,为进一步表达病毒衣壳蛋白及Nov感染的诊断试剂及防治疫苗药物研制提供基础依据。

     

    Abstract: ObjectiveTo obtain the open reading frame 2(ORF2)sequence of norovirus GI-I4 strain for further study on diagnosis and vaccine of norovirus.MethodsRNA was extracted from fecal sample.After transcription and PCR,the ORF2 gene was cloned in to simple T-vector.The sequences were analyzed with DNA Star software and compared with proto type sequences retrieved from the NCBI database by Clustal X and Treeview software.ResultsThe exact whole ORF2 gene of norovirusG II-4 stra in was obtained which coding 54 K Damino acid.Three strains in this study showed 92%-93% homology with VA 387 strains and 3 conserved regions.ConclusionORF2 gene of norovirus GI-I4 strain was obtained, which will lay the basis for further study on diagnosis and vaccine of norovirus.

     

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